Package: siplab 1.6

siplab: Spatial Individual-Plant Modelling

A platform for computing competition indices and experimenting with spatially explicit individual-based vegetation models.

Authors:Oscar Garcia <https://orcid.org/0000-0002-8995-1341>

siplab_1.6.tar.gz
siplab_1.6.zip(r-4.5)siplab_1.6.zip(r-4.4)siplab_1.6.zip(r-4.3)
siplab_1.6.tgz(r-4.4-any)siplab_1.6.tgz(r-4.3-any)
siplab_1.6.tar.gz(r-4.5-noble)siplab_1.6.tar.gz(r-4.4-noble)
siplab_1.6.tgz(r-4.4-emscripten)siplab_1.6.tgz(r-4.3-emscripten)
siplab.pdf |siplab.html✨
siplab/json (API)
NEWS

# Install 'siplab' in R:
install.packages('siplab', repos = c('https://ogarciav.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ogarciav/siplab/issues

Datasets:
  • boreasNP - Marked Point Pattern Tree Data from BOREAS
  • boreasNS - Marked Point Pattern Tree Data from BOREAS
  • boreasSA - Marked Point Pattern Tree Data from BOREAS
  • boreasSP - Marked Point Pattern Tree Data from BOREAS

On CRAN:

plant-ecologyplant-growthsimulation

4.97 score 3 stars 31 scripts 274 downloads 19 exports 20 dependencies

Last updated 3 years agofrom:06a724f0cb. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 23 2024
R-4.5-winOKNov 23 2024
R-4.5-linuxOKNov 23 2024
R-4.4-winOKNov 23 2024
R-4.4-macOKNov 23 2024
R-4.3-winOKNov 23 2024
R-4.3-macOKNov 23 2024

Exports:assimilationassimilation_pixcoreedgesflat_effgates_effgates_infgnomon_effgnomon_infpairwisepower_effpowers_kerpowlinear_selsize_selspurr_kerstaebler_kertass_efftass_infzoi_inf

Dependencies:abinddeldirgoftestlatticeMatrixmgcvnlmepolycliprpartspatstatspatstat.dataspatstat.explorespatstat.geomspatstat.linnetspatstat.modelspatstat.randomspatstat.sparsespatstat.univarspatstat.utilstensor

Computing Hegyi's (and other) Competition Indices

Rendered fromcindex.Rnwusingknitr::knitron Nov 23 2024.

Last update: 2020-09-04
Started: 2020-09-04

A Gentle Guide to Fully Spatial Models

Rendered fromgentle.Rnwusingknitr::knitron Nov 23 2024.

Last update: 2020-09-04
Started: 2020-09-04

Readme and manuals

Help Manual

Help pageTopics
Spatial Individual-Plant Simulationsiplab-package siplab
Compute Assimilation Indicesassimilation assimilation_pix
Marked Point Pattern Tree Data from BOREASboreasNP boreasNS boreasSA boreasSP
Adjust for Edge Effectscore edges
Efficiency Functionsefficiency flat_eff gates_eff gnomon_eff power_eff tass_eff
Influence Functionsgates_inf gnomon_inf influence tass_inf zoi_inf
Competition Kernel Functionskernel powers_ker spurr_ker staebler_ker
Compute Pairwise Competition Indicespairwise
Competitor Selection Rulespowlinear_sel select size_sel